Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825062.1_cds_XP_016502198.1_15865
CDS Infomation

[gene=LOC107820425] [db_xref=GeneID:107820425] [protein=polygalacturonase QRT3] [protein_id=XP_016502198.1] [location=join(17817..18023,18336..18563,22516..23592)] [gbkey=CDS]
Sequence

ATGCAGCCATTTTTTTGTTTAGCATTCTTGTTTTTACTACTTAATTTGGTTGTAGAAGTG
GCCAATGGGTCTCTTAGACAGTTGAAGCTTTATGAATTTCAAAAAGGACTTGAAGAGAAA
TTCCCTTCTTATTCCTCTTTCATCTATACCTCATCACCTTCACCATCTCCAGAAGCTTCT
GTTCCCAATTACTCGAATGCCAAAAAGAGTGAAGGAAGGGTAATTTATCCAATAGGGTAT
GGTGCTGATCCAACAGGGACAAGTGATAGCAGTGAAGCCATAAAAGAGGCTATTGGTGAT
GCTTTGAAATTGCAAAATGGACTTGGTTTGCTGCCTGGTATTAGTGATTTGGGTGGTGCC
ATTATTGATTTCCAAGGTGGTAATTACAGAATCAACAATCCTATAGTATTTCCTCCTGGC
GTTGGCAATATTGTGGTCAAAGGAGGAACAATAAGAGCATCCGATACATTTCCAGGCGAT
AGGCATCTAATTGAGCTATGGTCACAAGATTCTCCTAAGCTTGAAAAAGACTACATTTCT
CACCATGGTAACATTTTCGATAGGTGGGACCAAAACTTCGCGATTCGCTACGAGGGCATT
ACGTTCCGGGACATCCTCTTCGACTCGGGCTATCGAGGAGGAGGTTTATATGTCATTGAC
TCAGCTAGAATTCGTATAACAAGTTGCTTTTTCGTTCACTTTAGTACGGAAGGAGTTCTC
GTTCAGAGAGGCCACGAGACTTTTATATCGGACACTTTCCTAGGGCAACATCCTACAATT
GGCGGCGATAGAGGTGAGAGGGATTTCTCAGGCATAGCTATTGATCTTGCTAGCAATGAC
AATGCCATTACTGATGTTACTATCTTTTCATCAGCAATTGGGATTGTACTTAGGGGTGAG
GCTAATATTGTTACAGGGGTACATTGTTACAATAAGGCAACATATTTTGGTGGGGTTGGG
ATATTAGTTAAAGCATCCCAAAATAGGATAGATAATTGTTACCTTGACTATAACTCTATA
GTCATTGAGGACCCTTTCTTAGTTCACATCTCAAATGGGTATTTTCTTGGAGAGGGTAAC
GTTGTCTTGAAAGCGATTAACGGTCGAATTTTCGGACTAAATGTCATTAACAACATGTTT
AGTGGAAACCCTTCAAAAATGACACCAATGTTGAATTTGGATGGAGAGTTTACTGATATT
GATCAAGTTGTGATTGACCAAAATAATGTGAATGGTATGAGCTTGAAGTCAACTGCTGGA
AAATTGACTGTTGCTGGAAATGGGACAAGTTGGGTAGCTGATTTTTCTTCAATTCTTGTT
TTTCCTAACAAGATAAATCATGTACAATACTCATTTTATTGTAGAGGAGGGGTTGCTGGA
TTTCCTGCACATGCTGTAACAAATGTATCAAGTAATGTTGTGGTTATTGAGAGTGAAAAA
CCAGTTGATGGAGTGGTGTCAGTTTTTGTCGACCAACATAATATTGTGGGTGAAAAGAAC
TTTCTAATGTAA

Peptide Sequence

PEP ID

XP_016502198.1
PEP Infomation

PREDICTED: polygalacturonase QRT3 [Nicotiana tabacum]
Sequence

MQPFFCLAFLFLLLNLVVEVANGSLRQLKLYEFQKGLEEKFPSYSSFIYTSSPSPSPEAS
VPNYSNAKKSEGRVIYPIGYGADPTGTSDSSEAIKEAIGDALKLQNGLGLLPGISDLGGA
IIDFQGGNYRINNPIVFPPGVGNIVVKGGTIRASDTFPGDRHLIELWSQDSPKLEKDYIS
HHGNIFDRWDQNFAIRYEGITFRDILFDSGYRGGGLYVIDSARIRITSCFFVHFSTEGVL
VQRGHETFISDTFLGQHPTIGGDRGERDFSGIAIDLASNDNAITDVTIFSSAIGIVLRGE
ANIVTGVHCYNKATYFGGVGILVKASQNRIDNCYLDYNSIVIEDPFLVHISNGYFLGEGN
VVLKAINGRIFGLNVINNMFSGNPSKMTPMLNLDGEFTDIDQVVIDQNNVNGMSLKSTAG
KLTVAGNGTSWVADFSSILVFPNKINHVQYSFYCRGGVAGFPAHAVTNVSSNVVVIESEK
PVDGVVSVFVDQHNIVGEKNFLM

Transcript Sequence

Gene sequence data has not been registered.